When trying to submit a workflow to arvados I keep getting this error using the below commandline parameters.
CLI
arvados-cwl-runner /data/Tools/Test.cwl /data/Workflows/Inputs/Test.yaml
Traceback (most recent call last):
File "/usr/local/lib/python3.7/site-packages/arvados_cwl/arvcontainer.py", line 308, in run
).execute(num_retries=self.arvrunner.num_retries)
File "/usr/local/lib/python3.7/site-packages/googleapiclient/_helpers.py", line 130, in positional_wrapper
return wrapped(*args, **kwargs)
File "/usr/local/lib/python3.7/site-packages/googleapiclient/http.py", line 840, in execute
raise HttpError(resp, content, uri=self.uri)
arvados.errors.ApiError: <
Server Error
/var/www/arvados-api/current/app/models/container.rb:511:in `validate_change'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:382:in `block in make_lambda'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:169:in `block (2 levels) in halting'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:547:in `block (2 levels) in default_terminator'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:546:in `catch'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:546:in `block in default_terminator'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:170:in `block in halting'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:454:in `block in call'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:454:in `each'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:454:in `call'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:101:in `__run_callbacks__'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:750:in `_run_validate_callbacks'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activemodel-5.0.7.2/lib/active_model/validations.rb:408:in `run_validations!'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activemodel-5.0.7.2/lib/active_model/validations/callbacks.rb:113:in `block in run_validations!'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:126:in `call'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:506:in `block (2 levels) in compile'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:455:in `call'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:101:in `__run_callbacks__'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:750:in `_run_validation_callbacks'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activemodel-5.0.7.2/lib/active_model/validations/callbacks.rb:113:in `run_validations!'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activemodel-5.0.7.2/lib/active_model/validations.rb:338:in `valid?'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activerecord-5.0.7.2/lib/active_record/validations.rb:65:in `valid?'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activerecord-5.0.7.2/lib/active_record/validations.rb:82:in `perform_validations'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activerecord-5.0.7.2/lib/active_record/validations.rb:50:in `save!'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activerecord-5.0.7.2/lib/active_record/attribute_methods/dirty.rb:30:in `save!'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activerecord-5.0.7.2/lib/active_record/transactions.rb:324:in `block in save!'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activerecord-5.0.7.2/lib/active_record/transactions.rb:395:in `block in with_transaction_returning_status'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activerecord-5.0.7.2/lib/active_record/connection_adapters/abstract/database_statements.rb:230:in `transaction'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activerecord-5.0.7.2/lib/active_record/transactions.rb:211:in `transaction'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activerecord-5.0.7.2/lib/active_record/transactions.rb:392:in `with_transaction_returning_status'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activerecord-5.0.7.2/lib/active_record/transactions.rb:324:in `save!'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activerecord-5.0.7.2/lib/active_record/suppressor.rb:45:in `save!'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activerecord-5.0.7.2/lib/active_record/persistence.rb:51:in `create!'
/var/www/arvados-api/current/app/models/container.rb:194:in `block in resolve'
/var/www/arvados-api/current/lib/current_api_client.rb:129:in `block in act_as_system_user'
/var/www/arvados-api/current/lib/current_api_client.rb:140:in `act_as_user'
/var/www/arvados-api/current/lib/current_api_client.rb:128:in `act_as_system_user'
/var/www/arvados-api/current/app/models/container.rb:190:in `resolve'
/var/www/arvados-api/current/app/models/container_request.rb:265:in `set_container'
/var/www/arvados-api/shared/vendor_bundle/ruby/2.3.0/gems/activesupport-5.0.7.2/lib/active_support/callbacks.rb:382:in `block in make_lambda'