Arvados in a box installation (in AWS cloud).
Trying to run the example from Arvados | Starting a Workflow at the Command Line
Getting the following output:
Container exited with code: 0
copying “/HWI-ST1027_129_D0THKACXX.1_1.sam” (30918987 bytes)
mem 5187350528 cache 18480 pgmajfault 2536718336 rss
cpu 71478.7800 user 18453.8700 sys 4 cpus – interval 9.9999 seconds 33.7100 user 1.3700 sys
net:eth0 96036496 tx 864615737 rx – interval 9.9999 seconds 68616 tx 3430 rx
net:docker0 0 tx 0 rx – interval 9.9999 seconds 0 tx 0 rx
error in CaptureOutput: error creating output collection: arvados API server error: request failed: http://api.internal:8004/arvados/v1/collections: 401 Unauthorized: Not logged in (req-aepjfifrviss1mj3o3e3) (401: 401 Unauthorized) returned by arva2.arv.local:443
Cancelled
error in UpdateContainerFinal: arvados API server error: Log cannot be modified in state ‘Cancelled’ (nil, “a4885e654012445cfb10b98147a94591+214”) (req-1jvkyi3magaii16sey95) (422: 422 Unprocessable Entity) returned by arva2.arv.local:443
Running [arv-mount --unmount-timeout=8 --unmount /tmp/crunch-run.arva2-dz642-i0hqov7c0avvmey.301127480/keep872740663]
crunch-run finished
The log file has:
{“method”:“GET”,“path”:"/arvados/v1/containers",“format”:“html”,“controller”:“Arvados::V1::ContainersController”,“action”:“index”,“status”:200,“duration”:8.69,“view”:0.14,“db”:1.25,“request_id”:“req-hvnv1fodtnv71ugqoeoh”,“client_ipaddr”:“127.0.0.1”,“client_auth”:“arva2-gj3su-000000000000000”,“params”:{“count”:“none”,“filters”:"[[“uuid”,“in”,[“arva2-dz642-8nkkasdx2wie5xh”,“arva2-dz642-p3qdon2ybsaftxz”,“arva2-dz642-i0hqov7c0avvmey”]]]",“limit”:“100”,“offset”:“0”,“order”:"[“priority desc”]"},"@timestamp":“2021-04-13T16:32:47.420611965Z”,"@version":“1”,“message”:"[200] GET /arvados/v1/containers (Arvados::V1::ContainersController#index)"}
Can’t verify CSRF token authenticity.
#<ActiveRecord::RecordInvalid: Validation failed: Log cannot be modified in state ‘Cancelled’ (nil, “6b842c7a2d095c8573e93ee8eda6173c+214”)>
[“Log cannot be modified in state ‘Cancelled’ (nil, “6b842c7a2d095c8573e93ee8eda6173c+214”)”]
Error 1618331568+5cd8a53b: 422
Any ideas?